STRINGSTRING
rpl501 rpl501 rpl301 rpl301 rpl401 rpl401 tef3 tef3 rpl302 rpl302 rpl26 rpl26 rpl31 rpl31 rpl35 rpl35 rpl14 rpl14 rpl1801 rpl1801 elf1 elf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl50160S ribosomal protein L5-A; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throug [...] (294 aa)    
Predicted Functional Partners:
rpl301
60S ribosomal protein L3-A; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.997
rpl401
60S ribosomal protein L4-B.
  
 
 0.997
tef3
Elongation factor 3; The main role of EF-3 may be to transduce nucleoside triphosphate energy into mechanical energy for translocation during translation. EF-3 stimulates EF-1-alpha-dependent binding of aminoacyl- tRNA to the ribosome.
   
 
 0.995
rpl302
60S ribosomal protein L3-B; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.995
rpl26
60S ribosomal protein L26; Belongs to the universal ribosomal protein uL24 family.
  
 
 0.995
rpl31
60S ribosomal protein L31; Belongs to the eukaryotic ribosomal protein eL31 family.
   
 
 0.995
rpl35
60S ribosomal protein L35; Belongs to the universal ribosomal protein uL29 family.
  
 
 0.994
rpl14
60S ribosomal protein L14; Belongs to the eukaryotic ribosomal protein eL14 family.
  
 
 0.994
rpl1801
60S ribosomal protein L18-A.
  
 
 0.994
elf1
mRNA export factor elf1; Has a direct role in the mRNA export process. Appears to act within the rae1 mediated mRNA export pathway. Belongs to the ABC transporter superfamily. ABCF family. EF3 subfamily.
   
 
 0.993
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.