hemE protein (Alkalilimnicola ehrlichei) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	hemE	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen III to yield coproporphyrinogen III (By similarity) (365 aa)
		(Alkalilimnicola ehrlichei)
Predicted Functional Partners:
	Mlg_1372	Oxygen-independent coproporphyrinogen III oxidase (478 aa)	•	•		•	•	0.997
	Mlg_2634	Coproporphyrinogen oxidase (304 aa)	•			•	•	0.997
	Mlg_2670	Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethyl [...] (308 aa)	•	•	•		•	0.992
	Mlg_2828	Delta-aminolevulinic acid dehydratase (332 aa)	•	•			•	0.988
	Mlg_2669	Uroporphyrinogen-III synthase (261 aa)	•			•	•	0.971
	Mlg_2448	Coproporphyrinogen III oxidase, anaerobic (398 aa)				•		0.967
	Mlg_0737	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (373 aa)	•	•			•	0.951
	hemA	Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glut [...] (446 aa)	•	•			•	0.938
	hemL	Glutamate-1-semialdehyde 2,1-aminomutase (429 aa)	•	•			•	0.933
	cysG	Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylation of uropo [...] (481 aa)				•	•	0.908

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth