dapA protein (Alkalilimnicola ehrlichei) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	dapA	Dihydrodipicolinate synthase (290 aa)
		(Alkalilimnicola ehrlichei)
Predicted Functional Partners:
	dapB	Dihydrodipicolinate reductase (267 aa)	•	•		•	•	0.999
	Mlg_1231	Aspartate semialdehyde dehydrogenase (340 aa)	•	•		•	•	0.997
	Mlg_1822	Homoserine dehydrogenase (437 aa)				•	•	0.952
	Mlg_0209	Diaminopimelate decarboxylase (415 aa)	•	•			•	0.941
	Mlg_1480	aspartate kinase (416 aa)	•	•			•	0.936
	Mlg_2475	NlpBDapX lipoprotein (346 aa)	•					0.916
	dapD	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (272 aa)	•	•	•		•	0.899
	dapF	Diaminopimelate epimerase (279 aa)	•	•	•			0.864
	smpB	SsrA-binding protein; Binds specifically to the ssrA RNA (tmRNA) and is required for stable ass [...] (160 aa)	•					0.772
	pnp	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Hydrolyzes single-stra [...] (720 aa)	•		•			0.760

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth