pth protein (Alkalilimnicola ehrlichei) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	pth	Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity) (197 aa)
		(Alkalilimnicola ehrlichei)
Predicted Functional Partners:
	Mlg_0286	GTP-binding protein YchF (363 aa)	•				•	0.974
	rplY	50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome [...] (214 aa)	•		•		•	0.961
	Mlg_0283	Ribose-phosphate pyrophosphokinase (318 aa)	•			•	•	0.906
	ispE	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the positio [...] (291 aa)	•					0.837
	rpsR	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the [...] (74 aa)	•	•				0.837
	rplI	50S ribosomal protein L9; Binds to the 23S rRNA (By similarity) (150 aa)	•	•				0.823
	Mlg_1800	Transcription-repair coupling factor (1166 aa)	•					0.793
	glmU	Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (466 aa)	•					0.792
	Mlg_1975	FtsH peptidase. Metallo peptidase. MEROPS family M41 (639 aa)	•					0.792
	rplK	50S ribosomal protein L11; This protein binds directly to 23S ribosomal RNA (By similarity) (143 aa)	•			•		0.722

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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