dut protein (Burkholderia ambifaria) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	dut	Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism- it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA (By similarity) (148 aa)
		(Burkholderia ambifaria)
Predicted Functional Partners:
	Bamb_0961	Thymidylate synthase (323 aa)				•	•	0.982
	Bamb_2561	Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase (403 aa)	•	•		•		0.976
	ndk	Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other th [...] (141 aa)				•	•	0.971
	dcd	Deoxycytidine triphosphate deaminase (189 aa)				•		0.968
	tmk	Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways o [...] (206 aa)				•	•	0.939
	Bamb_0434	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of mis [...] (304 aa)			•		•	0.937
	pnp	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Hydrolyzes single-stra [...] (714 aa)	•					0.799
	rpsO	30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S r [...] (89 aa)	•					0.784
	Bamb_3145	transcriptional regulator, TetR family (191 aa)	•	•				0.782
	Bamb_1956	CMP/dCMP deaminase, zinc-binding (193 aa)	•			•		0.774

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth