lspA protein (Burkholderia ambifaria) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	lspA	Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (By similarity) (166 aa)
		(Burkholderia ambifaria)
Predicted Functional Partners:
	ileS	Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can in [...] (945 aa)	•		•	•	0.993
	Bamb_2558	FMN adenylyltransferase / riboflavin kinase (345 aa)	•	•			0.920
	lgt	Prolipoprotein diacylglyceryl transferase; Transfers the N-acyl diglyceride group on what will [...] (296 aa)	•	•		•	0.836
	rpsT	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (By similarity) (90 aa)	•			•	0.786
	Bamb_1731	pseudouridine synthase, RluA family (405 aa)	•				0.779
	glmM	Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1 [...] (451 aa)	•			•	0.771
	Bamb_2547	Peptidyl-prolyl cis-trans isomerase (151 aa)	•				0.760
	Bamb_2599	Integral membrane protein MviN (516 aa)	•				0.715
	Bamb_5904	Dihydroorotate oxidase B, catalytic subunit (325 aa)	•	•			0.712
	Bamb_2983	Biotin synthase (339 aa)	•				0.689

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth