hemF protein (Burkholderia ambifaria) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	hemF	Coproporphyrinogen III oxidase, aerobic (306 aa)
		(Burkholderia ambifaria)
Predicted Functional Partners:
	Bamb_0101	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporp [...] (392 aa)	•	•	•	•	0.997
	hemC	Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbil [...] (328 aa)	•			•	0.784
	hemH	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (354 aa)	•	•		•	0.761
	Bamb_0297	Delta-aminolevulinic acid dehydratase (332 aa)	•	•		•	0.739
	Bamb_2333	Phosphoribosylamine--glycine ligase (426 aa)	•				0.725
	Bamb_0791	Oxygen-independent coproporphyrinogen III oxidase (463 aa)				•	0.673
	Bamb_1560	protein of unknown function DUF188 (150 aa)	•				0.654
	Bamb_2715	Glycosyl transferase, family 51 (1035 aa)	•				0.648
	Bamb_2906	RNA methyltransferase, TrmH family, group 2 (170 aa)	•				0.621
	fmt	Methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of meth [...] (327 aa)	•				0.608

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Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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