version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
sfcA
NAD-linked malate dehydrogenase (565 aa)
(Shigella flexneri 8401)
Predicted Functional Partners:
ppsA
Phosphoenolpyruvate synthase (792 aa)
      0.952
pykF
Pyruvate kinase (542 aa)
      0.944
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (By similari [...] (312 aa)
     0.944
poxB
Pyruvate oxidase (572 aa)
      0.938
aceE
Pyruvate dehydrogenase (Decarboxylase component) (887 aa)
      0.931
pykA
Pyruvate kinase (480 aa)
      0.928
pflB
Formate acetyltransferase 1 (760 aa)
     0.923
tdcE
Probable formate acetyltransferase 3 (764 aa)
     0.923
pflD
Formate acetyltransferase 2 (765 aa)
       0.899
aldB
Aldehyde dehydrogenase B (Lactaldehyde dehydrogenase) (512 aa)
       0.899
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth