betA protein (Shigella flexneri 8401) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	betA	Choline dehydrogenase; Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine (By similarity) (556 aa)
		(Shigella flexneri 8401)
Predicted Functional Partners:
	betB	NAD+-dependent betaine aldehyde dehydrogenase (490 aa)	•	•	•	•	0.993
	betI	HTH-type transcriptional regulator betI; Repressor involved in choline regulation of the bet ge [...] (195 aa)	•	•		•	0.963
	betT	High-affinity choline transport (677 aa)	•	•		•	0.932
	S3040	Putative transport protein (237 aa)	•				0.595
	ydeD	Putative uncharacterized protein ydeD (299 aa)	•				0.593
	pdxY	Pyridoxamine kinase; Phosphorylates B6 vitamers; functions in a salvage pathway. Uses pyridoxam [...] (286 aa)	•	•			0.568
	cdh	CDP-diacylglycerol phosphotidylhydrolase (315 aa)				•	0.532
	yfcA	Putative structural protein (247 aa)	•				0.515
	ykgH	Putative uncharacterized protein ykgH (222 aa)	•				0.483
	proW	High-affinity transport system for glycine betaine and proline; Part of a binding-protein-depen [...] (354 aa)	•				0.477

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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