version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
ydcW
Gamma-aminobutyraldehyde dehydrogenase; Catalyzes the oxidation of 1-pyrroline, which is spontaneously formed from 4-aminobutanal, leading to 4- aminobutanoate (GABA) (By similarity) (474 aa)
(Escherichia coli 536)
Predicted Functional Partners:
ygjG
Putrescine-2-oxoglutaric acid aminotransferase, PLP-dependent; Catalyzes the aminotransferase r [...] (496 aa)
     0.958
betA
Choline dehydrogenase, a flavoprotein; Can catalyze the oxidation of choline to betaine aldehyd [...] (571 aa)
     0.925
adhP
Alcohol dehydrogenase, 1-propanol preferring (336 aa)
      0.905
ECP_0696
Putative iron-containing alcohol dehydrogenase (385 aa)
      0.901
adhE
Fused acetaldehyde-CoA dehydrogenase (891 aa)
       0.899
pepD
Aminoacyl-histidine dipeptidase (Peptidase D) (485 aa)
       0.899
ydcS
putative extracellular solute-binding protein YdcS precursor (381 aa)
      0.840
ydcU
Binding-protein-dependent transport system inner membrane component; Part of a binding-protein- [...] (313 aa)
      0.832
putA
PutA (1320 aa)
     0.811
ydcV
Hypothetical binding-protein-dependent transport system inner membrane component; Part of a bin [...] (264 aa)
       0.804
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth