alaS protein (Alcanivorax borkumensis) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	alaS	(alanyl-tRNA synthetase) (900 aa)
		(Alcanivorax borkumensis)
Predicted Functional Partners:
	alr	Alanine racemase; Provides the D-alanine required for cell wall biosynthesis (By similarity) (353 aa)	•		•		0.929
	ftsH	Cell division protein FtsH (638 aa)	•	•			0.854
	recA	Protein recA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the AT [...] (344 aa)	•				0.853
	recX	Regulatory protein recx (154 aa)	•				0.833
	ppc	Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for [...] (888 aa)	•		•		0.809
	mdh	Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (By similari [...] (328 aa)			•		0.800
	lysS	Lysyl-tRNA synthetase (504 aa)	•	•		•	0.795
	ABO_0113	Putative Holliday junction resolvase; Could be a nuclease that resolves Holliday junction inter [...] (133 aa)	•				0.795
	mnmA	tRNA-specific 2-thiouridylase mnmA; Catalyzes the 2-thiolation of uridine at the wobble positio [...] (364 aa)	•				0.776
	lysC	Aspartokinase (408 aa)	•				0.770

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Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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additional (white) nodes		or: network depth