rnc protein (Alcanivorax borkumensis) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	rnc	Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of ribosomal RNA precursors and of some mRNAs (By similarity) (228 aa)
		(Alcanivorax borkumensis)
Predicted Functional Partners:
	lepB	signal peptidase I; leader peptidase I (268 aa)	•		•	0.981
	era	GTP-binding protein Era homolog; Binds both GDP and GTP, has an intrinsic GTPase activity and i [...] (310 aa)	•		•	0.979
	ABO_1632	Putative uncharacterized protein (127 aa)	•			0.949
	lepA	GTP-binding protein LepA, putative (599 aa)	•		•	0.909
	pdxJ	Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the t [...] (244 aa)	•		•	0.903
	recO	DNA repair protein RecO; Involved in DNA repair and recF pathway recombination (225 aa)	•		•	0.878
	ftsY	Cell division protein FtsY (397 aa)	•	•	•	0.870
	plsX	Fatty acid/phospholipid synthesis protein plsX; Probably involved in fatty acid or phospholipid [...] (349 aa)	•	•		0.819
	pnp	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Hydrolyzes single-stra [...] (697 aa)	•		•	0.814
	acpP	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (By si [...] (77 aa)	•			0.800

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth