pdaD protein (Candidatus methanoarchaeon RC1)

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	pdaD	pyruvoyl-dependent arginine decarboxylase 1 (166 aa)
		(Candidatus methanoarchaeon RC1)
Predicted Functional Partners:
	speB	Agmatine ureohydrolase (288 aa)	•	•	0.982
	gdh-1	Glutamate dehydrogenase (439 aa)	•	•	0.922
	gdh-2	Glutamate dehydrogenase (417 aa)	•	•	0.920
	gltD	NADPH-dependent glutamate synthase, small subunit (466 aa)	•	•	0.903
	aat-5	Putative aspartate aminotransferase (374 aa)		•	0.899
	aat-4	Putative aspartate aminotransferase (381 aa)		•	0.899
	glnA-2	glutamine synthetase I (448 aa)		•	0.899
	glnA-1	glutamine synthetase I (480 aa)		•	0.899
	gltB1	NADPH-dependent glutamate synthase, large subunit domain 1 (364 aa)		•	0.899
	gltB2	NADPH-dependent glutamate synthase, large subunit domain 2 (503 aa)		•	0.899

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Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

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additional (white) nodes		or: network depth