version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
Meso_2169
coproporphyrinogen III oxidase (304 aa)
(Mesorhizobium sp. BNC1)
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporp [...] (342 aa)
    0.992
Meso_3202
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethyl [...] (309 aa)
      0.783
Meso_2724
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (353 aa)
     0.777
Meso_1129
Delta-aminolevulinic acid dehydratase (343 aa)
     0.745
Meso_0719
Phosphoribosylamine--glycine ligase (426 aa)
       0.707
greA
Transcription elongation factor greA; Necessary for efficient RNA polymerase transcription elon [...] (157 aa)
       0.670
Meso_2171
tRNA/rRNA methyltransferase (SpoU) (153 aa)
       0.667
Meso_4298
oxygen-independent coproporphyrinogen III oxidase (451 aa)
       0.655
Meso_2170
Putative uncharacterized protein (87 aa)
       0.650
fmt
Methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of meth [...] (311 aa)
       0.638
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth