version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
Sden_2937
rRNA (Guanine-N(2)-)-methyltransferase (383 aa)
(Shewanella denitrificans)
Predicted Functional Partners:
Sden_2936
ABC transporter, ATP-binding/permease protein (593 aa)
       0.627
Sden_2935
Isoprenylcysteine carboxyl methyltransferase (160 aa)
       0.529
Sden_2977
rRNA (guanine-N(2)-)-methyltransferase (345 aa)
    0.504
Sden_1415
protein of unknown function DUF45 (166 aa)
       0.468
Sden_0980
Transcriptional regulator BolA (99 aa)
       0.463
Sden_0774
Lipoprotein, putative (211 aa)
       0.452
Sden_2938
Universal stress protein family (297 aa)
       0.446
Sden_0771
Major facilitator superfamily MFS_1 (465 aa)
       0.446
Sden_0979
DNA-N1-methyladenine dioxygenase (255 aa)
       0.440
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth