lysS protein (Roseobacter denitrificans) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	lysS	Lysyl-tRNA synthetase (527 aa)
		(Roseobacter denitrificans)
Predicted Functional Partners:
	lysA	Diaminopimelate decarboxylase (421 aa)			•	0.899
	RD1_0698	Saccharopine dehydrogenase, putative (350 aa)			•	0.899
	RD1_2277	Putative uncharacterized protein (135 aa)		•		0.737
	RD1_1043	Putative uncharacterized protein (258 aa)		•		0.723
	RD1_1247	Putative uncharacterized protein (133 aa)	•			0.670
	RD1_3961	Dihydroorotate oxidase, putative (350 aa)	•			0.663
	prfC	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and [...] (535 aa)	•			0.662
	RD1_1245	Putative uncharacterized protein (140 aa)	•			0.646
	RD1_3438	Putative uncharacterized protein (178 aa)		•		0.576
	rpmB	Ribosomal protein L28 (120 aa)	•			0.524

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth