aroD protein (Clostridium difficile) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	aroD	3-dehydroquinate dehydratase (259 aa)
		(Clostridium difficile)
Predicted Functional Partners:
	aroB	3-dehydroquinate synthase (354 aa)	•	•		•	•	0.997
	aroE	Shikimate dehydrogenase (269 aa)	•	•		•	•	0.995
	aroA	3-phosphoshikimate 1-carboxyvinyltransferase (437 aa)	•	•		•	•	0.991
	ydiB	NAD-dependent shikimate 5-dehydrogenase (287 aa)	•	•	•	•	•	0.990
	CD2707	Putative transport protein (405 aa)	•		•		•	0.871
	aroC	chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase) (359 aa)	•				•	0.865
	CD1002	Putative regulatory protein (157 aa)	•					0.604
	rpsQ	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to t [...] (84 aa)	•					0.590
	aroK	Shikimate kinase (177 aa)	•				•	0.569
	rplP	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and poss [...] (143 aa)	•					0.561

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth