version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
fabH
3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and/or straight-chain of fatty acids (By similarity) (328 aa)
(Clostridium difficile)
Predicted Functional Partners:
fabD
Malonyl CoA-acyl carrier protein transacylase (316 aa)
   0.999
fabF
3-oxoacyl-[acyl-carrier-protein] synthase II (412 aa)
    0.998
fabG
3-oxoacyl-[acyl-carrier protein] reductase (249 aa)
    0.993
plsX
Fatty acid/phospholipid synthesis protein plsX; Probably involved in fatty acid or phospholipid [...] (340 aa)
     0.991
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzy [...] (284 aa)
     0.967
accA
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenz [...] (314 aa)
     0.960
CD1183
Acyl carrier protein (74 aa)
    0.951
fabZ
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Involved in saturated fatty acids bio [...] (142 aa)
    0.951
fabK
Trans-2-enoyl-ACP reductase (309 aa)
      0.929
CD1062
Acyl carrier protein (75 aa)
    0.912
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth