version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
xylA
Xylose isomerase (440 aa)
(Burkholderia cenocepacia 1054)
Predicted Functional Partners:
Bcen_6505
Xylulokinase (492 aa)
    0.997
Bcen_5066
Xylulokinase (488 aa)
    0.985
Bcen_1976
Xylulokinase (493 aa)
    0.983
Bcen_6504
D-xylose ABC transporter, substrate-binding protein (365 aa)
      0.936
Bcen_6507
Transcriptional regulator, AraC family (397 aa)
     0.930
Bcen_3551
Xylulokinase (515 aa)
     0.915
aceK
Isocitrate dehydrogenase kinase/phosphatase; Bifunctional enzyme which can phosphorylate or dep [...] (605 aa)
       0.899
Bcen_1060
PfkB (312 aa)
       0.899
Bcen_4542
UDP-glucose 6-dehydrogenase (470 aa)
       0.800
Bcen_0572
UDP-glucose 6-dehydrogenase (466 aa)
       0.800
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth