pth protein (Acidobacterium sp.) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	pth	Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity) (228 aa)
		(Acidobacterium sp.)
Predicted Functional Partners:
	Acid345_4539	LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosom [...] (233 aa)	•		•		•	0.953
	rplI	50S ribosomal protein L9; Binds to the 23S rRNA (By similarity) (153 aa)	•	•				0.938
	Acid345_4540	Ribose-phosphate pyrophosphokinase (359 aa)	•			•	•	0.935
	rpsF	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (By similarity) (147 aa)	•					0.915
	rpsR	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the [...] (123 aa)	•					0.875
	Acid345_3198	Protein of unknown function DUF933 (360 aa)	•				•	0.854
	Acid345_4541	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the positio [...] (312 aa)	•					0.840
	Acid345_4549	Transcription-repair coupling factor (1182 aa)	•					0.792
	glmU	Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (469 aa)	•					0.792
	Acid345_0064	FtsH peptidase. Metallo peptidase. MEROPS family M41 (637 aa)	•					0.792

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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