version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
aroC
Chorismate synthase (355 aa)
(Baumannia cicadellinicola)
Predicted Functional Partners:
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (428 aa)
• •• •• 0.998
aroB
3-dehydroquinate synthase (359 aa)
• •• •• 0.983
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic ac [...] (173 aa)
•    •• 0.946
prmB
Protein-(Glutamine-N5) methyltransferase (311 aa)
•  •  • 0.919
aroE
Dehydroshikimate reductase (254 aa)
•     • 0.873
pabA
Para-aminobenzoate synthase, glutamine amidotransferase component (196 aa)
•    •• 0.865
pabB
Para-aminobenzoate synthase, component I (452 aa)
•  • •  0.836
aroQ
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediat [...] (167 aa)
•       0.799
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized prot [...] (167 aa)
•       0.773
fabI
Enoyl-[acyl-carrier-protein] reductase (262 aa)
•       0.768
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth