version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (428 aa)
(Baumannia cicadellinicola)
Predicted Functional Partners:
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic ac [...] (173 aa)
    0.999
aroC
Chorismate synthase (355 aa)
   0.998
aroB
3-dehydroquinate synthase (359 aa)
   0.993
cmk
Cytidylate kinase (225 aa)
      0.985
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvat [...] (363 aa)
     0.980
aroE
Dehydroshikimate reductase (254 aa)
     0.975
rpsA
Ribosomal protein S1 (558 aa)
      0.923
aroQ
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediat [...] (167 aa)
       0.788
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4 [...] (313 aa)
       0.762
aspC
Aspartate aminotransferase (396 aa)
    0.750
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth