hemF protein (Chromohalobacter salexigens) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	hemF	Coproporphyrinogen III oxidase, aerobic (307 aa)
		(Chromohalobacter salexigens)
Predicted Functional Partners:
	hemE	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporp [...] (353 aa)	•		•	•	0.991
	Csal_0796	Protoporphyrinogen oxidase (476 aa)			•	•	0.965
	aroE	shikimate 5-dehydrogenase (271 aa)	•				0.869
	rimN	Putative ribosome maturation factor rimN; Required for the maturation of 16S rRNA. May keep an [...] (185 aa)	•				0.857
	Csal_3279	Delta-aminolevulinic acid dehydratase (344 aa)	•			•	0.820
	Csal_3109	Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethyl [...] (311 aa)	•			•	0.811
	Csal_0909	Phosphoribosylamine--glycine ligase (432 aa)	•				0.728
	Csal_0897	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (328 aa)	•	•		•	0.685
	Csal_1138	protein of unknown function DUF188 (153 aa)	•				0.662
	Csal_3202	RNA methyltransferase TrmH, group 2 (164 aa)	•				0.650

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth