version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
betA
Choline dehydrogenase, a flavoprotein; Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine (By similarity) (577 aa)
(Escherichia coli UTI89)
Predicted Functional Partners:
betB
Betaine aldehyde dehydrogenase, NAD-dependent (491 aa)
    0.998
betI
HTH-type transcriptional regulator betI; Repressor involved in choline regulation of the bet ge [...] (201 aa)
     0.985
betT
High-affinity choline transport protein (677 aa)
     0.959
ydcW
Gamma-aminobutyraldehyde dehydrogenase; Catalyzes the oxidation of 1-pyrroline, which is sponta [...] (474 aa)
     0.922
cdh
CDP-diacylglycerol pyrophosphatase (315 aa)
       0.710
eamA
Probable amino acid metabolite efflux pump (306 aa)
       0.594
ygdQ
Putative uncharacterized protein ygdQ (237 aa)
       0.585
pdxY
Pyridoxal kinase 2/pyridoxine kinase; Phosphorylates B6 vitamers; functions in a salvage pathwa [...] (287 aa)
      0.529
UTI89_C2612
Putative uncharacterized protein yfcA (269 aa)
       0.504
proW
High-affinity transport system for glycine betaine and proline; Part of a binding-protein-depen [...] (354 aa)
       0.480
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth