version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
cdsA
Phosphatidate cytidylyltransferase (231 aa)
(Rickettsia bellii RML)
Predicted Functional Partners:
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; This protein catalyzes the [...] (181 aa)
     0.976
uppS
Undecaprenyl pyrophosphate synthetase; Generates undecaprenyl pyrophosphate (UPP) from isopente [...] (264 aa)
       0.972
pssA
CDP-diacylglycerol--serine O-phosphatidyltransferase (256 aa)
      0.932
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase (241 aa)
       0.899
RBE_0747
Septum formation initiator; Required for the cell division process (108 aa)
       0.869
omp1
Outer membrane protein omp1 (768 aa)
      0.841
tsf
Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to [...] (309 aa)
       0.800
rpsB
30S ribosomal protein S2 (291 aa)
       0.800
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the t [...] (186 aa)
       0.800
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (By similarity) (239 aa)
       0.800
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth