version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) (By similarity) (321 aa)
(Rickettsia bellii RML)
Predicted Functional Partners:
waaA
3-deoxy-D-manno-octulosonic-acid transferase; Essential step in lipopolysaccharides biosynthesi [...] (418 aa)
•••  •• 0.999
lpxB
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosa [...] (381 aa)
• •  •  0.986
htrB
Lipid-A biosynthesis lauroyl acyltransferase (291 aa)
• •     0.944
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for [...] (244 aa)
• •   • 0.942
lpxC
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Involved in the biosynthesis of l [...] (288 aa)
• •     0.832
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (342 aa)
• •     0.811
lpxA
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynt [...] (281 aa)
• •     0.802
RBE_1334
Putative uncharacterized protein (218 aa)
• •     0.779
kpsF
KpsF (319 aa)
• •     0.699
ubiA
4-hydroxybenzoate octaprenyltransferase; Synthesis of 3-octaprenyl-4-hydroxybenzoate (276 aa)
•       0.661
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth