ubiC protein (Rhodoferax ferrireducens) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	ubiC	Probable chorismate--pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway (By similarity) (197 aa)
		(Rhodoferax ferrireducens)
Predicted Functional Partners:
	ubiA	4-hydroxybenzoate octaprenyltransferase; Synthesis of 3-octaprenyl-4-hydroxybenzoate (By simila [...] (296 aa)	•	•	0.970
	Rfer_3016	Putative transmembrane protein (303 aa)	•		0.869
	Rfer_3014	Thioesterase superfamily (139 aa)	•		0.869
	Rfer_3607	Anthranilate synthase, component I (503 aa)		•	0.800
	Rfer_3605	glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase (208 aa)		•	0.800
	aroC	Chorismate synthase (364 aa)		•	0.800
	Rfer_1569	Prephenate dehydratase / chorismate mutase (360 aa)		•	0.800
	Rfer_3688	ATP-dependent DNA helicase RecG (747 aa)	•		0.637
	Rfer_3017	Short-chain dehydrogenase/reductase SDR (260 aa)	•		0.611
	Rfer_3013	MCP methyltransferase, CheR-type (877 aa)	•		0.577

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Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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