version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
dxs1
1-deoxy-D-xylulose-5-phosphate synthase 1; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (By similarity) (639 aa)
(Jannaschia sp.)
Predicted Functional Partners:
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and [...] (393 aa)
     0.980
pdxJ
Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the t [...] (248 aa)
      0.907
Jann_0089
Farnesyl-diphosphate synthase (288 aa)
     0.902
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclo [...] (377 aa)
     0.816
Jann_0507
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4 [...] (319 aa)
     0.809
dxs2
1-deoxy-D-xylulose-5-phosphate synthase 2; Catalyzes the acyloin condensation reaction between [...] (636 aa)
     0.807
Jann_0090
Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large [...] (80 aa)
       0.752
Jann_3300
Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large a [...] (519 aa)
       0.724
Jann_0091
Histone deacetylase superfamily (307 aa)
       0.666
ispDF
Bifunctional enzyme ispD/ispF; Bifunctional enzyme that catalyzes the formation of 4- diphospho [...] (382 aa)
      0.642
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth