version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
tyrA
Prephenate dehydrogenase (363 aa)
(Staphylococcus aureus USA300)
Predicted Functional Partners:
pheA
Prephenate dehydratase (264 aa)
     0.989
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (432 aa)
    0.987
SAUSA300_0708
Histidinol-phosphate aminotransferase (352 aa)
     0.982
SAUSA300_1683
Chorismate mutase/phospho-2-dehydro-3-deoxyheptonate aldolase (363 aa)
      0.977
SAUSA300_2610
Histidinol-phosphate aminotransferase hisC (337 aa)
      0.908
SAUSA300_1599
ACT domain protein PheB (151 aa)
       0.899
aroC
Chorismate synthase (388 aa)
      0.846
aroK
Shikimate kinase (174 aa)
      0.800
cmk
Cytidylate kinase (183 aa)
       0.798
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptop [...] (404 aa)
      0.798
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth