Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARHGAP35 | PLXNB1 | ENSBTAP00000066047 | ENSBTAP00000017840 | Rho GTPase activating protein 35. | Plexin B1. | 0.537 |
ARHGAP35 | RHOA | ENSBTAP00000066047 | ENSBTAP00000005600 | Rho GTPase activating protein 35. | Transforming protein RhoA; Small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. Mainly associated with cytoskeleton organization, in active state binds to a variety of effector proteins to regulate cellular responses such cytoskeletal dynamics, cell migration and cell cycle. Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Involved in a microtubule-dependent signal that is required for the myosin contractile ring formation during cell cycle cytokinesis. Plays an essent [...] | 0.978 |
ARHGAP35 | RHOD | ENSBTAP00000066047 | ENSBTAP00000027446 | Rho GTPase activating protein 35. | Ras homolog family member D. | 0.526 |
ARHGAP35 | RND1 | ENSBTAP00000066047 | ENSBTAP00000024996 | Rho GTPase activating protein 35. | Rho-related GTP-binding protein Rho6; Lacks intrinsic GTPase activity. Has a low affinity for GDP, and constitutively binds GTP. Controls rearrangements of the actin cytoskeleton. Induces the Rac-dependent neuritic process formation in part by disruption of the cortical actin filaments. Causes the formation of many neuritic processes from the cell body with disruption of the cortical actin filaments (By similarity). | 0.853 |
ITSN2-2 | RHOA | ENSBTAP00000066922 | ENSBTAP00000005600 | Uncharacterized protein. | Transforming protein RhoA; Small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. Mainly associated with cytoskeleton organization, in active state binds to a variety of effector proteins to regulate cellular responses such cytoskeletal dynamics, cell migration and cell cycle. Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Involved in a microtubule-dependent signal that is required for the myosin contractile ring formation during cell cycle cytokinesis. Plays an essent [...] | 0.886 |
ITSN2-2 | RHOD | ENSBTAP00000066922 | ENSBTAP00000027446 | Uncharacterized protein. | Ras homolog family member D. | 0.837 |
ITSN2-2 | RND1 | ENSBTAP00000066922 | ENSBTAP00000024996 | Uncharacterized protein. | Rho-related GTP-binding protein Rho6; Lacks intrinsic GTPase activity. Has a low affinity for GDP, and constitutively binds GTP. Controls rearrangements of the actin cytoskeleton. Induces the Rac-dependent neuritic process formation in part by disruption of the cortical actin filaments. Causes the formation of many neuritic processes from the cell body with disruption of the cortical actin filaments (By similarity). | 0.848 |
PLXNA1 | PLXNA2 | ENSBTAP00000030566 | ENSBTAP00000001558 | Plexin A1. | Plexin A2. | 0.918 |
PLXNA1 | PLXNA4 | ENSBTAP00000030566 | ENSBTAP00000019327 | Plexin A1. | Plexin A4. | 0.906 |
PLXNA1 | PLXNB1 | ENSBTAP00000030566 | ENSBTAP00000017840 | Plexin A1. | Plexin B1. | 0.777 |
PLXNA1 | PLXNB3 | ENSBTAP00000030566 | ENSBTAP00000013391 | Plexin A1. | Plexin B3. | 0.650 |
PLXNA1 | RHOA | ENSBTAP00000030566 | ENSBTAP00000005600 | Plexin A1. | Transforming protein RhoA; Small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. Mainly associated with cytoskeleton organization, in active state binds to a variety of effector proteins to regulate cellular responses such cytoskeletal dynamics, cell migration and cell cycle. Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Involved in a microtubule-dependent signal that is required for the myosin contractile ring formation during cell cycle cytokinesis. Plays an essent [...] | 0.433 |
PLXNA1 | RHOD | ENSBTAP00000030566 | ENSBTAP00000027446 | Plexin A1. | Ras homolog family member D. | 0.939 |
PLXNA1 | RND1 | ENSBTAP00000030566 | ENSBTAP00000024996 | Plexin A1. | Rho-related GTP-binding protein Rho6; Lacks intrinsic GTPase activity. Has a low affinity for GDP, and constitutively binds GTP. Controls rearrangements of the actin cytoskeleton. Induces the Rac-dependent neuritic process formation in part by disruption of the cortical actin filaments. Causes the formation of many neuritic processes from the cell body with disruption of the cortical actin filaments (By similarity). | 0.976 |
PLXNA2 | PLXNA1 | ENSBTAP00000001558 | ENSBTAP00000030566 | Plexin A2. | Plexin A1. | 0.918 |
PLXNA2 | PLXNA4 | ENSBTAP00000001558 | ENSBTAP00000019327 | Plexin A2. | Plexin A4. | 0.902 |
PLXNA2 | PLXNB1 | ENSBTAP00000001558 | ENSBTAP00000017840 | Plexin A2. | Plexin B1. | 0.610 |
PLXNA2 | PLXNB3 | ENSBTAP00000001558 | ENSBTAP00000013391 | Plexin A2. | Plexin B3. | 0.598 |
PLXNA2 | RHOD | ENSBTAP00000001558 | ENSBTAP00000027446 | Plexin A2. | Ras homolog family member D. | 0.927 |
PLXNA2 | RND1 | ENSBTAP00000001558 | ENSBTAP00000024996 | Plexin A2. | Rho-related GTP-binding protein Rho6; Lacks intrinsic GTPase activity. Has a low affinity for GDP, and constitutively binds GTP. Controls rearrangements of the actin cytoskeleton. Induces the Rac-dependent neuritic process formation in part by disruption of the cortical actin filaments. Causes the formation of many neuritic processes from the cell body with disruption of the cortical actin filaments (By similarity). | 0.939 |
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