version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pdxH
Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) (By similarity) (198 aa)
(Anaeromyxobacter dehalogenans)
Predicted Functional Partners:
Adeh_1500
Pyridoxal phosphate biosynthetic protein PdxJ; Catalyzes the complicated ring closure reaction [...] (242 aa)
      0.945
tyrS
Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reacti [...] (420 aa)
      0.810
Adeh_0573
Phenazine biosynthesis PhzC/PhzF protein (266 aa)
       0.658
Adeh_0277
DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic a [...] (280 aa)
       0.652
Adeh_1456
conserved hypothetical protein, YceI (223 aa)
       0.644
Adeh_2369
Nodulation efficiency protein NfeD (472 aa)
       0.642
hemL
Glutamate-1-semialdehyde 2,1-aminomutase (430 aa)
       0.636
Adeh_1832
Methylmalonyl-CoA mutase (140 aa)
       0.612
Adeh_0180
Histidine triad (HIT) protein (114 aa)
       0.603
Adeh_0188
3-dehydroquinate synthase (389 aa)
       0.602
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth