version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, recA interacts with lexA causing an autocatalytic cleavage which disrupts the DNA-binding part of lexA, leading to derepression of the SOS regulon and eventually DNA repair (By similarity) (229 aa)
(Anaeromyxobacter dehalogenans)
Predicted Functional Partners:
Adeh_3964
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the AT [...] (358 aa)
    0.818
dnaE2
Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesi [...] (1132 aa)
      0.794
Adeh_3617
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the AT [...] (316 aa)
    0.764
Adeh_0141
DNA-directed DNA polymerase (418 aa)
      0.752
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dep [...] (289 aa)
      0.662
Adeh_4346
DNA gyrase subunit A (907 aa)
       0.655
Adeh_1700
Conserved hypothetical membrane protein (301 aa)
       0.647
Adeh_1275
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of D [...] (699 aa)
      0.642
gcp
Probable O-sialoglycoprotein endopeptidase (334 aa)
       0.639
Adeh_2745
Ribose-5-phosphate isomerase (147 aa)
       0.625
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth