hmgA protein (Rhodopseudomonas palustris HaA2)

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	hmgA	Homogentisate 1,2-dioxygenase (448 aa)
		(Rhodopseudomonas palustris HaA2)
Predicted Functional Partners:
	RPB_0908	Maleylacetoacetate isomerase (218 aa)	•	•	•	•	0.999
	fahA	Fumarylacetoacetate hydrolase (422 aa)	•	•		•	0.976
	cphA1	Putative beta lactamase (316 aa)	•				0.833
	RPB_0903	3-(3-hydroxy-phenyl)propionate hydroxylase (540 aa)	•	•			0.708
	RPB_0904	Putative uncharacterized protein (74 aa)	•	•			0.683
	RPB_0905	Putative uncharacterized protein (89 aa)	•				0.636
	RPB_0902	Transcriptional regulator, MarR family (165 aa)	•				0.527
	RPA1097	Protein of unknown function DUF28 (248 aa)	•				0.481
	RPB_4272	Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in [...] (198 aa)	•				0.474
	ruvA	Holliday junction ATP-dependent DNA helicase ruvA; The ruvA-ruvB complex in the presence of ATP [...] (222 aa)	•				0.457

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth