STRING 9.05 
  tgt protein (Synechococcus sp. JA33) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
tgt
queuine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (By similarity) (367 aa)
(Synechococcus sp. JA33)
Predicted Functional Partners:
queA
S-adenosylmethionine-tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moi [...] (396 aa)
   0.997
secD
preprotein translocase subunit SecD (448 aa)
     0.933
pnp
polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Hydrolyzes single-str [...] (712 aa)
     0.920
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs ( [...] (253 aa)
     0.909
fmt
methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of meth [...] (322 aa)
      0.882
aroB
3-dehydroquinate synthase (403 aa)
      0.880
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in th [...] (299 aa)
     0.878
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitr [...] (118 aa)
    0.871
aroC
chorismate synthase (378 aa)
      0.868
truA
tRNA pseudouridine synthase A (287 aa)
      0.864
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
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Co-expression Experiments Databases Textmining
 
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