tgt protein (Rhizobium etli CFN42)

STRING 9.05

tgt protein (Rhizobium etli CFN42) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	tgt	queuine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (By similarity) (376 aa)
		(Rhizobium etli CFN42)
Predicted Functional Partners:
	queA	S-adenosylmethionine-tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moi [...] (361 aa)	•		•	•	•	•	0.999
	yajC	preprotein tranlocase protein (115 aa)	•			•		•	0.975
	queF	7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazagu [...] (154 aa)	•				•	•	0.974
	pnp	polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Hydrolyzes single-str [...] (712 aa)	•			•		•	0.922
	queC	succinoglycan biosynthesis transcriptional regulator protein; Catalyzes the transformation of G [...] (236 aa)	•					•	0.916
	ypf00274	putative S-adenosylmethionine tRNA ribosyltransferase protein (348 aa)	•		•		•	•	0.910
	thyA	thymidylate synthase; Provides the sole de novo source of dTMP for DNA biosynthesis (By similar [...] (264 aa)	•	•		•		•	0.908
	trmD	tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs ( [...] (220 aa)	•			•		•	0.905
	secD1	bifunctional preprotein translocase subunit SecD/SecF (849 aa)	•			•		•	0.900
	pth	peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which dro [...] (240 aa)	•			•		•	0.897

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: high (84%)

Permalink