trmD protein (Phytoplasma asteris) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	trmD	tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (By similarity) (242 aa)
		(Phytoplasma asteris)
Predicted Functional Partners:
	rplS	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface a [...] (118 aa)	•	•	•	0.992
	rpsP	SSU ribosomal protien S16P (87 aa)	•			0.930
	rpsM	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts sever [...] (126 aa)	•	•	•	0.883
	infA	Translation initiation factor IF-1; No specific function has so far been attributed to this ini [...] (78 aa)	•	•	•	0.867
	rplQ	LSU ribosomal protein L17P (118 aa)	•	•		0.864
	rpsK	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several dispa [...] (128 aa)	•	•		0.848
	ffh	Signal recognition particle, subunit FFH/SRP54 (456 aa)	•		•	0.822
	rpoA	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcrip [...] (330 aa)	•	•		0.781
	rpsD	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rR [...] (198 aa)	•	•		0.775
	rplM	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S riboso [...] (152 aa)	•	•		0.771

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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