STRING 9.05 
  mutM protein (Rhodospirillum rubrum) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
mutM
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates (By similarity) (281 aa)
(Rhodospirillum rubrum)
Predicted Functional Partners:
Rru_A3514
DNA polymerase A (924 aa)
      0.951
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzy [...] (229 aa)
     0.941
Rru_A3251
A/G-specific DNA-adenine glycosylase (359 aa)
      0.928
Rru_A1582
DNA polymerase III subunit alpha (1170 aa)
      0.909
coaD
phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- [...] (172 aa)
      0.880
Rru_A1852
RNAse III (221 aa)
      0.863
recA
recombinase A; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the A [...] (366 aa)
      0.849
Rru_A0410
DnaB helicase (507 aa)
      0.834
uvrC
excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing o [...] (639 aa)
      0.826
Rru_A3530
DNA polymerase IV (421 aa)
      0.825
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
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Co-expression Experiments Databases Textmining
 
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