rnc protein (Carboxydothermus hydrogenoformans)

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	rnc	Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of ribosomal RNA precursors and of some mRNAs (By similarity) (235 aa)
		(Carboxydothermus hydrogenoformans)
Predicted Functional Partners:
	fabF	3-oxoacyl-(Acyl-carrier-protein) synthase II (412 aa)	•			0.969
	smc	Chromosome segregation protein SMC (1185 aa)	•			0.969
	ftsY	Signal recognition particle-docking protein FtsY (303 aa)	•	•	•	0.948
	acpP	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (By si [...] (77 aa)	•			0.931
	plsX	Fatty acid/phospholipid synthesis protein plsX; Probably involved in fatty acid or phospholipid [...] (330 aa)	•	•		0.920
	fabD	Malonyl CoA-acyl carrier protein transacylase (312 aa)	•			0.899
	fabH	3-oxoacyl-(Acyl-carrier-protein) synthase III (330 aa)	•			0.876
	rpmF	50S ribosomal protein L32 (58 aa)	•			0.854
	era	GTP-binding protein era homolog; Binds both GDP and GTP, has an intrinsic GTPase activity and i [...] (298 aa)	•		•	0.850
	lepB	Signal peptidase I (184 aa)	•		•	0.840

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth