rph protein (Carboxydothermus hydrogenoformans)

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	rph	Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (By similarity) (254 aa)
		(Carboxydothermus hydrogenoformans)
Predicted Functional Partners:
	CHY_0315	non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (202 aa)	•	•	0.996
	CHY_0316	Putative phosphoesterase (156 aa)	•		0.950
	murI	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis (By similari [...] (265 aa)	•		0.936
	CHY_0312	Metallo-beta-lactamase family protein (242 aa)	•		0.918
	CHY_0313	Putative uncharacterized protein (300 aa)	•		0.869
	CHY_0311	Putative CoA-substrate-specific enzyme activase (253 aa)	•		0.869
	CHY_0310	Putative uncharacterized protein (324 aa)	•		0.849
	mutE	Methylaspartate mutase, E subunit (482 aa)	•		0.849
	CHY_0411	Putative oxygen-independent coproporphyrinogen III oxidase (376 aa)	•		0.792
	CHY_0308	conserved hypothetical protein TIGR01319 (450 aa)	•		0.785

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth