ubiC protein (Pseudoalteromonas haloplanktis)

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	ubiC	Probable chorismate--pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway (By similarity) (181 aa)
		(Pseudoalteromonas haloplanktis)
Predicted Functional Partners:
	ubiA	4-hydroxybenzoate octaprenyltransferase; Synthesis of 3-octaprenyl-4-hydroxybenzoate (By simila [...] (292 aa)	•	•	•	0.996
	pabA	Putative glutamine amidotransferase (193 aa)	•		•	0.877
	trpG	Anthranilate synthase component II (Glutamine amido-transferase) (242 aa)	•		•	0.805
	trpE	Anthranilate synthase component I (522 aa)			•	0.800
	aroC	chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase) (365 aa)			•	0.800
	pheA	chorismate mutase P / prephenate dehydratase (386 aa)			•	0.800
	tyrA	chorismate mutase / prephenate dehydrogenase (379 aa)			•	0.800
	recG	ATP-dependent DNA helicase recG (673 aa)	•			0.691
	PSHAa2312	flagellar basal body-associated protein (132 aa)	•			0.630
	PSHAa0078	Putative uncharacterized protein (586 aa)		•		0.613

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

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additional (white) nodes		or: network depth