version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
BURPS1710b_3729
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (By similarity) (199 aa)
(Burkholderia pseudomallei 1710b)
Predicted Functional Partners:
aroB
3-dehydroquinate synthase (359 aa)
   0.999
aroA/tyrA
3-phosphoshikimate 1-carboxyvinyltransferase (714 aa)
    0.995
BURPS1710b_A1897
Shikimate 5-dehydrogenase (284 aa)
    0.990
BURPS1710b_3493
Shikimate 5-dehydrogenase (292 aa)
   0.988
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (451 aa)
    0.946
BPSL0684
Putative 3-phosphoskimimate 1-carboxyvinyltransferase (435 aa)
       0.899
BPSL3170
Type II/III secretion system protein (575 aa)
       0.897
aroC
Chorismate synthase (520 aa)
     0.869
pheA
P-protein [bifunctional includes- chorismate mutase and prephenate dehydratase (360 aa)
      0.854
BPSL2929
Shikimate kinase (171 aa)
       0.800
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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additional (white) nodes         or: network depth