ubiC1 protein (Pseudomonas fluorescens PfO1)

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	ubiC1	Probable chorismate--pyruvate lyase 1; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway (By similarity) (185 aa)
		(Pseudomonas fluorescens PfO1)
Predicted Functional Partners:
	ubiA	4-hydroxybenzoate octaprenyltransferase; Synthesis of 3-octaprenyl-4-hydroxybenzoate (By simila [...] (296 aa)	•		•	0.959
	Pf01_0709	Transcriptional regulator, ArsR family (121 aa)	•			0.640
	Pf01_1714	Putative uncharacterized protein (123 aa)		•		0.538
	Pf01_3662	Peptidase M14, carboxypeptidase A (383 aa)		•		0.490
	Pf01_0566	AsmA (691 aa)		•		0.478
	htpG	Chaperone protein htpG; Molecular chaperone. Has ATPase activity (By similarity) (634 aa)	•			0.445
	Pf01_0708	RND efflux system, outer membrane lipoprotein, NodT (483 aa)	•			0.426
	Pf01_3703	Putative uncharacterized protein (224 aa)		•		0.419
	Pf01_0707	Acriflavin resistance protein (1025 aa)	•			0.413
	Pf01_0706	Secretion protein HlyD (366 aa)	•			0.413

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth