version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
Ava_0346
TPR repeat (739 aa)
(Anabaena variabilis)
Predicted Functional Partners:
Ava_4803
Tetratricopeptide TPR_3 (340 aa)
      0.696
Ava_0345
General secretion pathway protein H (176 aa)
       0.539
Ava_0348
TPR repeat (563 aa)
     0.505
Ava_4658
Unidentified ORF in hydrogenase gene cluster (198 aa)
       0.494
Ava_3295
TPR repeat (311 aa)
       0.483
Ava_2388
Glycosyl transferase, family 2 (1007 aa)
     0.427
Ava_2394
Putative uncharacterized protein (740 aa)
     0.423
Ava_2381
Peptidase C14, caspase catalytic subunit p20 (717 aa)
       0.411
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth