kdsA protein (Colwellia psychrerythraea) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	kdsA	2-dehydro-3-deoxyphosphooctonate aldolase (280 aa)
		(Colwellia psychrerythraea)
Predicted Functional Partners:
	CPS_4539	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (181 aa)	•	•			•		0.988
	kdsB	3-deoxy-D-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) fo [...] (280 aa)	•	•		•		•	0.980
	CPS_4538	KpsF/GutQ family protein (321 aa)	•	•					0.944
	pyrG	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or am [...] (542 aa)	•		•			•	0.898
	eno	Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. I [...] (432 aa)	•					•	0.865
	aroC	Chorismate synthase (373 aa)	•						0.788
	aroB	3-dehydroquinate synthase (354 aa)	•						0.788
	aroA	3-phosphoshikimate 1-carboxyvinyltransferase (426 aa)	•						0.782
	aroE	shikimate 5-dehydrogenase (275 aa)	•						0.772
	aroK	Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic ac [...] (172 aa)	•	•					0.762

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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