version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
PHA45
Serine hydroxymethyltransferase 1; Interconversion of serine and glycine (417 aa)
(Pseudomonas syringae 1448A)
Predicted Functional Partners:
PSPPH_3513
Threonine aldolase, low-specificity (334 aa)
     0.986
PSPPH_0550
Phosphoserine phosphatase SerB (404 aa)
     0.985
folD2
Bifunctional protein folD 2; Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10 [...] (300 aa)
   0.977
folD1
Bifunctional protein folD 1; Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10 [...] (284 aa)
   0.975
sdaA
L-serine ammonia-lyase (458 aa)
      0.971
metH
5-methyltetrahydrofolate--homocysteine methyltransferase (1239 aa)
      0.969
thyA
Thymidylate synthase (323 aa)
     0.967
purN
Phosphoribosylglycinamide formyltransferase (216 aa)
    0.967
folA
Dihydrofolate reductase (170 aa)
      0.962
soxD
Sarcosine oxidase, delta subunit (98 aa)
      0.960
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth