trmD protein (Blochmannia pennsylvanicus) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	trmD	tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (By similarity) (255 aa)
		(Blochmannia pennsylvanicus)
Predicted Functional Partners:
	rplS	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface a [...] (116 aa)	•			•	•	0.995
	rimM	Ribosome maturation factor rimM; An accessory protein needed during the final step in the assem [...] (189 aa)	•			•	•	0.986
	rpsP	30S ribosomal subunit protein S16 (80 aa)	•			•	•	0.982
	ispF	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Converts 4-diphosphocytidyl-2-C-methyl-D [...] (157 aa)	•	•				0.925
	ffh	4.5S-RNP protein (453 aa)	•				•	0.913
	rnhB	Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By simil [...] (217 aa)	•					0.796
	rpsD	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rR [...] (207 aa)	•			•		0.768
	rpsA	30S ribosomal subunit protein S1 (564 aa)	•			•		0.765
	ligA	DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosp [...] (595 aa)	•		•			0.759
	rpsM	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts sever [...] (121 aa)	•			•	•	0.756

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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