version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
tyrA
Prephenate dehydrogenase (363 aa)
(Staphylococcus saprophyticus)
Predicted Functional Partners:
SSP0876
Putative prephenate dehydratase (267 aa)
     0.989
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (432 aa)
    0.987
hisC
Histidinol-phosphate aminotransferase (351 aa)
     0.983
SSP1026
DAHP synthetase-chorismate mutase (363 aa)
      0.978
SSP0428
Putative histidinol-phosphate aminotransferase (334 aa)
      0.912
pheB
ACT domain-containing protein pheB; May be a phenylalanine-binding regulatory protein (Potentia [...] (151 aa)
       0.899
aroC
Chorismate synthase (388 aa)
      0.839
aroE
shikimate 5-dehydrogenase (265 aa)
      0.823
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic ac [...] (170 aa)
      0.810
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptop [...] (404 aa)
      0.808
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth