version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
clpP1
ATP-dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity) (188 aa)
(Corynebacterium jeikeium)
Predicted Functional Partners:
clpX
ATP-dependent Clp protease, ATP-binding subunit (424 aa)
• ••• • 0.995
clpP2
ATP-dependent Clp protease proteolytic subunit 2; Cleaves peptides in various proteins in a pro [...] (209 aa)
• • ••••0.942
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthe [...] (526 aa)
•   • • 0.910
yidC
Preprotein translocase YidC subunit (324 aa)
  •     0.604
clpC
ATP-dependent Clp protease (885 aa)
   •• • 0.596
valS
Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadverten [...] (932 aa)
•       0.553
groS
10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity [...] (99 aa)
•  •  • 0.541
dnaK
Chaperone protein dnaK; Acts as a chaperone (By similarity) (620 aa)
      • 0.529
clpB
ATP-dependent Clp protease, ATP-binding subunit ClpB (873 aa)
   •  • 0.494
groL1
60 kDa chaperonin 1; Prevents misfolding and promotes the refolding and proper assembly of unfo [...] (547 aa)
•     • 0.483
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth