version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
betA
Choline dehydrogenase; Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine (By similarity) (568 aa)
(Pseudomonas syringae B728a)
Predicted Functional Partners:
betB
Betaine aldehyde dehydrogenase (490 aa)
    0.987
betI
HTH-type transcriptional regulator betI; Repressor involved in choline regulation of the bet ge [...] (197 aa)
     0.966
Psyr_0227
Aldehyde dehydrogenase (NAD+) (499 aa)
      0.911
Psyr_0629
Aldehyde dehydrogenase (NAD+) (506 aa)
      0.908
Psyr_3524
Aldehyde dehydrogenase (NAD+) (505 aa)
      0.907
Psyr_4813
Short-chain dehydrogenase/reductase SDR (257 aa)
       0.899
Psyr_3054
Choline/ethanolamine kinase-Aminoglycoside phosphotransferase (311 aa)
       0.899
Psyr_4827
BCCT transporter (664 aa)
     0.873
Psyr_1258
Peptidase M23B (274 aa)
       0.535
Psyr_4731
Sigma-70 region 2-Sigma-70 region 4 (172 aa)
       0.465
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth