version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
gyrA
DNA gyrase subunit A; DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings (860 aa)
(Synechocystis sp.)
Predicted Functional Partners:
gyrB
DNA gyrase subunit B; DNA gyrase negatively supercoils closed circular double- stranded DNA in [...] (1078 aa)
   0.993
slr0418
hypothetical protein (303 aa)
       0.869
recF
DNA replication and repair protein recF; The recF protein is involved in DNA metabolism; it is [...] (384 aa)
      0.842
dnaA
Chromosomal replication initiator protein dnaA; Plays an important role in the initiation and r [...] (447 aa)
      0.797
dnaN
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible [...] (391 aa)
      0.781
slr1530
Slr1530 protein; Participates in chromosomal partition during cell division. May act via the fo [...] (280 aa)
       0.733
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcript [...] (1102 aa)
       0.721
recA
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the AT [...] (354 aa)
     0.685
serS
Seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoac [...] (430 aa)
       0.649
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporp [...] (350 aa)
       0.647
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth